Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938570.1_cds_XP_016483392.1_74511
CDS Infomation

[gene=LOC107804089] [db_xref=GeneID:107804089] [protein=endoglucanase 11-like] [protein_id=XP_016483392.1] [location=complement(join(173883..174524,176733..176987,177616..177816,178278..178490,178600..178848))] [gbkey=CDS]
Sequence

ATGGCTGAAATAATGCAGAAGAAGAAACCGTCTTTTGCTTATCATTTCTCTTTATACAGA
TTTTTAAAACATTTTTCTGTTCTGCTTTCACTCTCCACCATTTTTTCTTCTGTTAGAGCT
TTTGATTATGCAGATGCTCTTTCCAAAAGTCTTCTTTATTTTGAAGCTCAAAGGTCTGGT
CGTTTACCTTATAATCAACGTGTCACTTGGCGCGACCATTCTGGCTTAACTGATGGCTTA
GAACAAGGAGTAGATTTGGTTGGAGGATACTATGATGCTGGAGACCATGTTAAATTTGGG
CTGCCAATGGCATTTACAGTAACAATGTTGTCATGGGGTGTAACTGAATATGGTGAAGAG
ATTTCTTATGTAGGTGAAATGGAACATGCTTTTGAAGCTATCAAATGGGGTACTGATTAC
TTCATCAAAGCACACACTAGCCCAAATGTGTTATGGGCAGAGGTGGGAGATGGAGATACT
GATCATTACTGTTGGCAACGGCCGGAGGACATGACAACTTCTAGGCAAGCATTCAAAATT
GACGAGAATAACCCTGGTTCCGACCTAGCCGGAGAGACGGCAGCGGCAATGGCAGCGGCG
TCGATTGTGTTTAGAAAAAATAATCCACATTATTCTCACTTACTATTGCACCACGCCCAA
GAGTTATTTGAGTTTGGTGAAAAATACAGAGGGAAATATGATAACAGTGTGGGAGAAGTG
AAGAGCTATTATGCATCAGTGAGTGGTTACGAAGATGAGTTGTTGTGGGCAGCATTGTGG
CTATACAAAGCCACCGACAATGAAGAGTATTTGAAGTATGTAATTAACAATGCAAATTCC
TTTGGGGGTATTGGTTGGGCTATTACCGAGTTCAGTTGGGATGTAAAGTTTGCTGGTCTC
CAAATTATTGCTTCCAAGTTACTGCAAGAGGAAAAGCACAAGGAACATAGTCACATGCTG
GAACAATATCGATCAAAAGCCGAACACTACATATGTTCATGTCTTAACAAAAACAACGGC
AGTAGCAACGTTGAGCGTACTCCGGGCGGCTTATTATACGTCCGGCAATGGAACAACATG
CAGTACGTATCGACGTCGGCTTTCTTACTCTCAGTTTACTCAGATTTCCTTCAAAAATCC
AACCAGAAAATCAGCTGCAGTGAAGGAATAGTTGATCATGAAGATCTCTTCAATTTTGCC
AAATCTCAAGTAGACTACATATTGGGCTTTAACCCAAGAAATATGAGTTATCTTGTGGGC
TTTGGCCCAAATTACCCAAAAAGAGTCCACCACAGAGGGGCCTCAATTGTGTCCTATAGA
GAAAACAAAGGCTTTATTGGTTGTACTCAAGGGTATGACTATTGGTATAACAGAGATGAG
CCCAACCCAAATATTTTAATTGGGGCTTTGGTTGGTGGGCCAGATAATCAAGATAATTTT
GAAGATGATAGAGCAAATTATGTGCAGACGGAGGCGTGTACATATAATACAGCACCTCTA
GTTGGAATTTTCGCAAAGTTGAATTTCCTGAATAATCCACCATTAATTGCATCTTTCTAA

Peptide Sequence

PEP ID

XP_016483392.1
PEP Infomation

PREDICTED: endoglucanase 11-like [Nicotiana tabacum]
Sequence

MAEIMQKKKPSFAYHFSLYRFLKHFSVLLSLSTIFSSVRAFDYADALSKSLLYFEAQRSG
RLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWGVTEYGEE
ISYVGEMEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRQAFKI
DENNPGSDLAGETAAAMAAASIVFRKNNPHYSHLLLHHAQELFEFGEKYRGKYDNSVGEV
KSYYASVSGYEDELLWAALWLYKATDNEEYLKYVINNANSFGGIGWAITEFSWDVKFAGL
QIIASKLLQEEKHKEHSHMLEQYRSKAEHYICSCLNKNNGSSNVERTPGGLLYVRQWNNM
QYVSTSAFLLSVYSDFLQKSNQKISCSEGIVDHEDLFNFAKSQVDYILGFNPRNMSYLVG
FGPNYPKRVHHRGASIVSYRENKGFIGCTQGYDYWYNRDEPNPNILIGALVGGPDNQDNF
EDDRANYVQTEACTYNTAPLVGIFAKLNFLNNPPLIASF

Transcript Sequence

Gene sequence data has not been registered.